GeneReporter

literature and homology reporter

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Enter or paste a DNA/PROTEIN sequence in FASTA-format:

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Homology-based document retrieval

	NCBI-BLAST	WU-BLAST	PSI-BLAST
Program:
Database:
E-value cutoff:				default: 1e-1
Bit score cutoff:	bits	bits	bits	default: 1 bit
Max. passes:				default: 3

These services are executed at the EBI

NCBI-BLAST | WU-BLAST | PSI-BLAST Options

PubMed

Start year:		Number of publications:
End year:		Organism specific search:

Additional query	terms as comma separated lists.
AND:		NOT:
Journals AND:		Authors :

This service is executed at the NCBI

PubMed Options
copyright and disclaimer

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Analysis of the protein sequences

InterProScan

InterProScan searches for signature matches and GO annotation in the InterPro database.

BlastProDom	FPrintScan	Gene3D	HMMPanther	HMMPfam
HMMPIR	HMMSmart	HMMTigr	ProfileScan	PatternScan
SignalPHMM	SuperFamily	TMHMM

This service is executed at the EBI

InterProScan Options

Phobius

Phobius predicts transmembrane topology and signal
peptides from the amino acid sequence of a protein.

There are no options for Phobius

This service is executed at the EBI

Phobius Options

PrediSi

PrediSi predicts signal peptides in the
amino acid sequence of a protein.

Specification:

This service is executed at the TU-Braunschweig

PrediSi Options

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